SNP Profiles of SIAL 339 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	CT	CC	GG	GT	AT	AC	CT	AG	GT	AG	TT	AA
1._SIAL339	_	_	_	_	_	_	_	AC	_	_	_	AG	_	_
2._RUQ_48	_	_	_	_	_	_	_	AC	_	_	_	AG	_	_
3._RUQ_48	_	_	_	_	_	_	_	AC	_	_	_	AG	_	_

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	AA	CC	CC	CT	AC	AG	CG	AT	AC	CT	TT	AG	CC
1._SIAL339	_	_	_	_	_	_	_	CG	_	AC	CT	_	_	_
2._RUQ_48	GG	_	_	_	_	CC	_	CG	_	AC	CT	_	_	_
3._RUQ_48	GG	_	_	_	_	CC	_	CG	_	AC	AG	_	_	_

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	AA	CG	CT	GG	AG	TT	TT	AC	AA	TT	CG	AG	CC	AG
1._SIAL339	_	_	_	_	_	_	_	_	_	_	CG	_	_	_
2._RUQ_48	_	_	CT	GG	AG	_	_	AC	_	_	CG	-	_	AG
3._RUQ_48	_	_	_	CC	AG	_	_	AC	_	CC	CG	AG	_	AG

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CT	CT	AA	CC	AG	TT	CT	GT	AA	CC	TT	GG	TT	AG
1._SIAL339	_	_	_	_	_	_	_	_	_	_	_	_	_	_
2._RUQ_48	CC	_	_	_	_	_	_	_	_	_	TT	_	_	_
3._RUQ_48	_	_	_	_	AG	_	_	_	_	_	AA	_	_	_

	57	58	59	60
_Input profile	GG	CG	CT	AT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._SIAL339	_	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._RUQ_48	_	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._RUQ_48	_	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: SIAL_339 RUQ_48

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

1._SIAL_339 SIAL339

identical
7 shared markers

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Center for Forestry Research and Technology Transfer, Vietnam

Location: CEFORTT

Jocelyn De Wever et al., 2019

2._SIAL_339 RUQ_48

93.8 %
16 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

3._SIAL_339 RUQ_48

73.5 %
17 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP13	2	TcSNP19	3	TcSNP33	4	TcSNP49	5	TcSNP52
6	TcSNP131	7	TcSNP143	8	TcSNP144	9	TcSNP176	10	TcSNP189
11	TcSNP194	12	TcSNP230	13	TcSNP290	14	TcSNP305	15	TcSNP329
16	TcSNP363	17	TcSNP421	18	TcSNP519	19	TcSNP522	20	TcSNP529
21	TcSNP546	22	TcSNP577	23	TcSNP589	24	TcSNP591	25	TcSNP602
26	TcSNP640	27	TcSNP642	28	TcSNP644	29	TcSNP645	30	TcSNP660
31	TcSNP702	32	TcSNP723	33	TcSNP731	34	TcSNP739	35	TcSNP800
36	TcSNP823	37	TcSNP835	38	TcSNP836	39	TcSNP872	40	TcSNP899
41	TcSNP945	42	TcSNP998	43	TcSNP999	44	TcSNP1010	45	TcSNP1019
46	TcSNP1053	47	TcSNP1062	48	TcSNP1112	49	TcSNP1144	50	TcSNP1205
51	TcSNP1230	52	TcSNP1237	53	TcSNP1253	54	TcSNP1275	55	TcSNP1293
56	TcSNP1401	57	TcSNP1404	58	TcSNP1458	59	TcSNP1524	60	TcSNP1527